PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D01G1068
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 163aa    MW: 19027.2 Da    PI: 9.2476
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D01G1068genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1431e-1354108357
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                  + k++rrk++NRe+A+rsR RKk ++e+L++ v ++  eN++Lk++l    +++ 
  Gh_D01G1068  54 DEKKQRRKISNRESAKRSRWRKKRYLENLTNQVNKMNIENRRLKNRLHLVLNQCH 108
                  569*******************************************998888885 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.3E-1252107No hitNo description
SMARTSM003389.3E-1452116IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.61154100IPR004827Basic-leucine zipper domain
PfamPF001701.3E-1056107IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.68E-1156108No hitNo description
CDDcd147021.97E-1557108No hitNo description
PROSITE patternPS0003605974IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MFSAEEAVGS QLPVHESGFT PEELNELLSF FESNEPVSSN SSSENSSRAI YSPDEKKQRR  60
KISNRESAKR SRWRKKRYLE NLTNQVNKMN IENRRLKNRL HLVLNQCHVV WVDNEQLRSE  120
SFALWAKLLD LYWTLAAMQC NHDNSRHSLS CFNSNKLSSH SIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15876RRKISNRESAKRSRWRKKR
27396RKKRYLENLTNQVNKMNIENRRLK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012466633.11e-114PREDICTED: basic leucine zipper 43-like
TrEMBLA0A0D2NMR01e-114A0A0D2NMR0_G
STRINGPOPTR_0014s01390.17e-44(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM122322432
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.11e-17basic leucine-zipper 5